Jaime Francisco Cruz Fonseca
Jaime Francisco Cruz Fonseca-
From 2016 to Present
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At ALGORITMI
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Academic Degree
Dr Habil (Agregação)
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Current Position
Associate Professor with Habilitation (Professor Associado com Agregação) at Escola de Engenharia da Universidade do Minho
Personal Webpage
Personal E-mail
ORCID
FCT Public Key
J003578DEGUn
DeGóis
8319979112053253
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Jaime C. Fonseca, is Associate Professor (with tenure) at the Department of Industrial Electronics, University of Minho. He is the coordinator of the Industrial Electronics line at the Algoritmi research centre, Member of the scientific committee of the doctoral program in Industrial Engineering Electronics and Computers and CEO of iSurgical3D
company Spin Off of Minho University.He participated in 45 research projects (35 is the PI) mostly in close cooperation with the industry. Her research focus on automation, robotics and medical devices.He has authored or co-authored in 95 indexed (e.g. ISI, Scopus) publications in international peer reviewed journals (e.g. IEEE transactions on bio-medical engineering, IEEE Transactions on Medical Imaging, European Heart Journal Cardiovascular Imaging, Machine Vision and Applications) and conferences (e.g. SPIE, IECON). He has a total of 473 scopus citations (h index 12) and 764 Google Scholar citations (h index of 15, i10 index of 25).He has co-authored in 3 Portuguese patents and 1 international patent. Won the awards : 1) SpinUM – Concurso Ideias e Negócio”, with “3DPectus System”, sponsored by Tecminho, SpinPark, Cotec and InovCapital (2009); and 2) START – Prémio Nacional de Empreendedorismo 2009”, iSurgical3D, sponsored by BPI, Optimus Negócios e Universidade Nova de Lisboa. With the award START founded the iSurgical3D company a Spin-Off at Minho University.
- Automated generation of synthetic in-car dataset for human body pose detection.Borges, J.; Oliveira, B.; Torres, H.; Rodrigues, N.; Queir\'os, S.; Shiller, M&VISIGRAPP 2020 - Proceedings of the 15th International Joint Conference on Computer Vision, Imaging and Computer Graphics Theory and Applications2020
ALGORITMI Members
- FIBR3DEmul—an open-access simulation solution for 3D printing processes of FDM machines with 3+ actuated axes.Faria, C.; Fonseca, J.; Bicho, E.International Journal of Advanced Manufacturing Technology2020
- Technical Note: Assessment of electromagnetic tracking systems in a surgical environment using ultrasonography and ureteroscopy instruments for percutaneous renal access.Gomes-Fonseca, J.; Veloso, F.; Queir\'os, S.; Morais, P.; Pinho, A.C.M.&semMedical Physics2020
- Path Generation, Control, and Monitoring.Faria, C.; Martins, D.; Matos, M.A.; Pinho, D.; Ramos, B.; Bicho, E.&Advanced Structured Materials2020
- Real-Time Human Body Pose Estimation for In-Car Depth Images.Torres, H.R.; Oliveira, B.; Fonseca, J.; Queir\ós, S.; Borges&commIFIP Advances in Information and Communication Technology2019
- Three-dimensional color Doppler ultrasound simulation to mimic paravalvular regurgitation.Queir\'os, S.; Gao, H.; De Santis, G.; Papachristidis, A.; Fonseca, J.C.; Vila&amProgress in Biomedical Optics and Imaging - Proceedings of SPIE2019
- Design, modelling and control of an active weight-bearing knee exoskeleton with a series elastic actuator.Freitas, B.; Silva, M.; Carvalho, ?.; Renjewski, D.; Fonseca, J.; Flores, P&perio6th IEEE Portuguese Meeting on Bioengineering, ENBENG 2019 - Proceedings2019
ALGORITMI Members
- Semi-automatic aortic valve tract segmentation in 3D cardiac magnetic resonance images using shape-based B-spline explicit active surfaces.Queiros, S.; Morais, P.; Fonseca, J.C.; D'Hooge, J.; Vila?a, J.L.Progress in Biomedical Optics and Imaging - Proceedings of SPIE2019
- Automatic strategy for extraction of anthropometric measurements for the diagnostic and evaluation of deformational plagiocephaly from infant's head models.Oliveira, B.; Torres, H.R.; Veloso, F.; Vilhena, E.; Rodrigues, N.F.; Fonseca&cProgress in Biomedical Optics and Imaging - Proceedings of SPIE2019
- Top-down human pose estimation with depth images and domain adaptation.Rodrigues, N.; Torres, H.; Oliveira, B.; Borges, J.; Queir\'os, S.; Mendes, J&VISIGRAPP 2019 - Proceedings of the 14th International Joint Conference on Computer Vision, Imaging and Computer Graphics Theory and Applications2019
- Patient-specific outcome simulation after surgical correction of Pectus Excavatum: A preliminary study.Couto, M.; Gomes-Fonseca, J.; Moreira, A.H.J.; Henriques-Coelho, T.; Fonseca, J.C&periodProgress in Biomedical Optics and Imaging - Proceedings of SPIE2019
ALGORITMI Members
- Surface-based registration between CT and US for image-guided percutaneous renal access – A feasibility study.Gomes-Fonseca, J.; Queir\'os, S.; Morais, P.; Pinho, A.C.M.; Fonseca, J.C&pMedical Physics2019
- Predicting the output dimensions, porosity and elastic modulus of additive manufactured biomaterial structures targeting orthopedic implants.Bartolomeu, F.; Fonseca, J.; Peixinho, N.; Alves, N.; Gasik, M.; Silva, F.S&periJournal of the Mechanical Behavior of Biomedical Materials2019
ALGORITMI Members
- Deep learning-based detection of anthropometric landmarks in 3D infants head models.Torres, H.R.; Oliveira, B.; Veloso, F.; Ruediger, M.; Burkhardt, W.; Moreira, A&Progress in Biomedical Optics and Imaging - Proceedings of SPIE2019
- Assessment of aortic valve tract dynamics using automatic tracking of 3D transesophageal echocardiographic images.Queir\'os, S.; Morais, P.; Fehske, W.; Papachristidis, A.; Voigt, J.-U.; Fonseca&The international journal of cardiovascular imaging2019
- Segmentation of kidney and renal collecting system on 3D computed tomography images.Oliveira, B.; Torres, H.R.; Queir\'os, S.; Morais, P.; Fonseca, J.C.; 2018 IEEE 6th International Conference on Serious Games and Applications for Health, SeGAH 20182018
- MITT: Medical Image Tracking Toolbox.Queiros, S.; Morais, P.; Barbosa, D.; Fonseca, J.C.; Vilaca, J.L.; D'hooge&IEEE Transactions on Medical Imaging2018
- Kidney segmentation in ultrasound, magnetic resonance and computed tomography images: A systematic review.Torres, H.R.; Queir\'os, S.; Morais, P.; Oliveira, B.; Fonseca, J.C.; Computer Methods and Programs in Biomedicine2018
- A novel multi-atlas strategy with dense deformation field reconstruction for abdominal and thoracic multi-organ segmentation from computed tomography.Oliveira, B.; Queir\'os, S.; Morais, P.; Torres, H.R.; Gomes-Fonseca, J.; FonsecaMedical Image Analysis2018
- Validation of a Novel Software Tool for Automatic Aortic Annular Sizing in Three-Dimensional Transesophageal Echocardiographic Images.Queir\'os, S.; Morais, P.; Dubois, C.; Voigt, J.-U.; Fehske, W.; Kuhn, Journal of the American Society of Echocardiography2018
- Personalized dynamic phantom of the right and left ventricles based on patient-specific anatomy for echocardiography studies - Preliminary results.Gomes-Fonseca, J.; Morais, P.; Queir\'os, S.; Veloso, F.; Pinho, A.C.M.&sem2018 IEEE 6th International Conference on Serious Games and Applications for Health, SeGAH 20182018
- A dual-modal CT/US kidney phantom model for image-guided percutaneous renal access.Gomes-Fonseca, J.; Miranda, A.; Morais, P.; Queirós, S.; Pinho, A.C.M.;2018
ALGORITMI Members
- Automatic 3D aortic annulus sizing by computed tomography in the planning of transcatheter aortic valve implantation.Queir\'os, S.; Dubois, C.; Morais, P.; Adriaenssens, T.; Fonseca, J.C.; Vila&Journal of Cardiovascular Computed Tomography2017
- A new methodology for assessment of pectus excavatum correction after bar removal in Nuss procedure: Preliminary study.Gomes-Fonseca, J.; Vila?a, J.L.; Henriques-Coelho, T.; Direito-Santos, B.; Pinho, A.C&perJournal of Pediatric Surgery2017
ALGORITMI Members
- Fully automatic 3-D-TEE segmentation for the planning of transcatheter aortic valve implantation.Queir\'os, S.; Papachristidis, A.; Morais, P.; Theodoropoulos, K.C.; Fonseca, J.C&periIEEE Transactions on Biomedical Engineering2017
- Fast left ventricle tracking using localized anatomical affine optical flow.Queir\'os, S.; Vila?a, J.L.; Morais, P.; Fonseca, J.C.; D'hooge, J&perioInternational Journal for Numerical Methods in Biomedical Engineering2017
- Kidney segmentation in 3D CT images using B-Spline Explicit Active Surfaces.Torres, H.R.; Oliveira, B.; Queiros, S.; Morais, P.; Fonseca, J.C.; D'Hooge&2016 IEEE International Conference on Serious Games and Applications for Health, SeGAH 20162016
- Aortic Valve Tract Segmentation from 3D-TEE Using Shape-Based B-Spline Explicit Active Surfaces.Queir\'os, S.; Papachristidis, A.; Barbosa, D.; Theodoropoulos, K.C.; Fonseca, J.C&perIEEE Transactions on Medical Imaging2016
- Multi-centre validation of an automatic algorithm for fast 4D myocardial segmentation in cine CMR datasets.Queir\'os, S.; Barbosa, D.; Engvall, J.; Ebbers, T.; Nagel, E.; Sarvari, S&perEuropean Heart Journal Cardiovascular Imaging2016
- Voxel-based registration of simulated and real patient CBCT data for accurate dental implant pose estimation.Moreira, A.H.J.; Queiros, S.; Morais, P.; Rodrigues, N.F.; Correia, A.R&perioProgress in Biomedical Optics and Imaging - Proceedings of SPIE2015
- Finite element analysis of pectus carinatum surgical correction via a minimally invasive approach.Neves, S.C.; Pinho, A.; Fonseca, J.C.; Rodrigues, N.F.; Henriques-Coelho, T.&Computer Methods in Biomechanics and Biomedical Engineering2015
- Accuracy Comparison of Implant Impression Techniques: A Systematic Review.Moreira, A.H.J.; Rodrigues, N.F.; Pinho, A.C.M.; Fonseca, J.C.; Vila&Clinical Implant Dentistry and Related Research2015
- Fast left ventricle tracking in CMR images using localized anatomical affine optical flow.Queir\'os, S.; Vila?a, J.L.; Morais, P.; Fonseca, J.C.; D'hooge, J&perioProgress in Biomedical Optics and Imaging - Proceedings of SPIE2015
- Validation of percutaneous puncture trajectory during renal access using 4D ultrasound reconstruction.Rodrigues, P.L.; Rodrigues, N.F.; Fonseca, J.C.; Vila?a, J.L.Progress in Biomedical Optics and Imaging - Proceedings of SPIE2015
- A-scan ultrasound system for real-time puncture safety assessment during percutaneous nephrolithotomy.Rodrigues, P.L.; Rodrigues, N.F.; Fonseca, J.C.; Von Kr\"uger, M.A.; Pereira&Progress in Biomedical Optics and Imaging - Proceedings of SPIE2015
- Automatic modeling of pectus excavatum corrective prosthesis using artificial neural networks.Rodrigues, P.L.; Rodrigues, N.F.; Pinho, A.C.M.; Fonseca, J.C.; Correia-Pinto&amMedical Engineering and Physics2014
- Artificial neural networks for automatic modelling of the pectus excavatum corrective prosthesis.Rodrigues, P.L.; Moreira, A.H.J.; Rodrigues, N.F.; Pinho, A.; Fonseca, J&periProgress in Biomedical Optics and Imaging - Proceedings of SPIE2014
- Electromagnetic tracker feasibility in the design of a dental superstructure for edentulous patients.Moreira, A.H.J.; Queiros, S.; Rodrigues, N.F.; Pinho, A.C.M.; Fonseca,IEEE MeMeA 2014 - IEEE International Symposium on Medical Measurements and Applications, Proceedings2014
- Preliminary clinical trial in percutaneous nephrolithotomy using a real-time navigation system for percutaneous kidney access.Rodrigues, P.L.; Moreira, A.H.J.; Rodrigues, N.F.; Pinho, A.C.M.; FonProgress in Biomedical Optics and Imaging - Proceedings of SPIE2014
- An electromagnetic tracker system for the design of a dental superstructure.Moreira, A.H.J.; Queir\'os, S.; Rodrigues, N.F.; Pinho, A.C.M.; FonBiodental Engineering III - Proceedings of the 3rd International Conference on Biodental Engineering, BIODENTAL 20142014
- Automatic prebent customized prosthesis for pectus excavatum minimally invasive surgery correction.Vila?a, J.L.; Rodrigues, P.L.; Soares, T.R.; Fonseca, J.C.; Pinho, A&amSurgical Innovation2014
ALGORITMI Members
- Nanostructured Hollow Tubes Based on Chitosan and Alginate Multilayers.Silva, J.M.; Duarte, A.R.C.; Cust\'odio, C.A.; Sher, P.; Neto, A&Advanced Healthcare Materials2014
ALGORITMI Members
- Adhesive nanostructured multilayer films using a bacterial exopolysaccharide for biomedical applications.Costa, R.R.; Neto, A.I.; Calgeris, I.; Correia, C.R.; Pinho, A.C.M&Journal of Materials Chemistry B2013
ALGORITMI Members
- Assessment of 3D scanners for modeling pectus carinatum corrective bar.Moreira, A.H.J.; Fonseca, J.G.; Rodrigues, P.L.; Fonseca, J.C.; Pinho,VISAPP 2013 - Proceedings of the International Conference on Computer Vision Theory and Applications2013
- Automatic modeling of an orthotic bracing for nonoperative correction of Pectus Carinatum.Vila?a, J.L.; Rodrigues, P.L.; Moreira, A.H.J.; Fonseca, J.G.; Pinho&aVISAPP 2013 - Proceedings of the International Conference on Computer Vision Theory and Applications2013
- Variations of the soft tissue thicknesses external to the ribs in Pectus Excavatum patients.Rodrigues, P.L.; Direito-Santos, B.; Moreira, A.H.J.; Fonseca, J.C.; Pinho, A&Journal of Pediatric Surgery2013
- Kidney targeting and puncturing during percutaneous nephrolithotomy: Recent advances and future perspectives.Rodrigues, P.L.; Rodrigues, N.F.; Fonseca, J.; Lima, E.; Vila?a, J.L.Journal of Endourology2013
- Collecting system percutaneous access using real-time tracking sensors: First pig model in vivo experience.Rodrigues, P.L.; Vila?a, J.L.; Oliveira, C.; Cicione, A.; Rassweiler, J.;Journal of Urology2013
- Thoracic wall reconstruction using ultrasound images to model/bend the thoracic prosthesis for correction of pectus excavatum.Fonseca, J.G.; Moreira, A.H.J.; Rodrigues, P.L.; Fonseca, J.C.; Pinho,Progress in Biomedical Optics and Imaging - Proceedings of SPIE2012
- Pectus excavatum postsurgical outcome based on preoperative soft body dynamics simulation.Moreira, A.H.J.; Rodrigues, P.L.; Fonseca, J.; Pinho, A.C.M.; Rodrigues&commProgress in Biomedical Optics and Imaging - Proceedings of SPIE2012
- A region-based algorithm for automatic bone segmentation in volumetric CT.Rodrigues, P.L.; Moreira, A.H.J.; Fonseca, J.C.; Pinho, A.C.; Rodrigues&commImage Processing: Methods, Applications and Challenges2012
- Virtual simulation of the postsurgical cosmetic outcome in patients with Pectus Excavatum.Vila?a, J.L.; Moreira, A.H.J.; L-Rodrigues, P.; Rodrigues, N.; Fonseca, J&periProgress in Biomedical Optics and Imaging - Proceedings of SPIE2011
- An image processing application for liver tumour segmentation.Rodrigues, P.; Vilaca, J.L.; Fonseca, J.1st Portuguese Meeting in Biomedical Engineering, ENBENG 20112011
ALGORITMI Members
- 3D surface profile equipment for the characterization of the pavement texture - TexScan.Vilaa, J.L.; Fonseca, J.C.; Pinho, A.C.M.; Freitas, E.Mechatronics2010
ALGORITMI Members
- Non-contact 3D acquisition system based on stereo vision and laser triangulation.Vila?a, J.L.; Fonseca, J.C.; Pinho, A.M.Machine Vision and Applications2010
ALGORITMI Members
- WinCE-based embedded system for control of an industrial screw machine.Moreira, A.H.J.; Fonseca, J.; Tavares, A.IECON Proceedings (Industrial Electronics Conference)2009
- A new machine for acquire pavement texture.Vila?a, J.L.; Fonseca, J.C.; Pinho, A.M.; Freitas, E.ICCC 2009 - IEEE 7th International Conference on Computational Cybernetics2009
ALGORITMI Members
- Automatic trajectory generation for the milling of sculpted surfaces acquired from laser scanning systems.Vila?a, J.L.; Fonseca, J.C.; Pinho, A.C.M.IECON Proceedings (Industrial Electronics Conference)2009
ALGORITMI Members
- Calibration procedure for 3D measurement systems using two cameras and a laser line.Vila?a, J.L.; Fonseca, J.C.; Pinho, A.M.Optics and Laser Technology2009
ALGORITMI Members
- A new software application for footwear industry.Vila?a, J.L.; Fonseca, J.2007 IEEE International Symposium on Intelligent Signal Processing, WISP2007
ALGORITMI Members
- Stereo vision calibration procedure for 3D surface measurements.Vila?a, J.L.; Fonseca, J.; Pinho, A.C.IECON Proceedings (Industrial Electronics Conference)2006
ALGORITMI Members
- Off-line robot programming framework.Bottazzi, V.S.; Fonseca, J.F.C.Proceedings of the Joint International Conference on Autonomic and Autonomous Systems and International Conference on Networking and Services, ICAS/ICNS 20052005
ALGORITMI Members
- A kalman filter for validate points and areas of constant depth in the acquisition of the profile surfaces.Fonseca, J.; Martins, J.; Couto, C.IECON Proceedings (Industrial Electronics Conference)2005
- Application of a web-based monitoring and control system in plastic rotational moulding machine.Rodrigues, M.; Mendes, J.; Fonseca, J.Proceedings of the IEEE International Conference on Industrial Technology2004
- Multisensor fusion for acquisition of the profile of surfaces.Fonseca, J.; Mendes, J.; Martins, J.; Couto, C.Proceedings of the IEEE International Conference on Industrial Technology2004
- Automatic velocity control in cutting-off machines.Machado, C.; Fonseca, J.; Mendes, J.Proceedings of the IEEE International Conference on Industrial Technology2003
- Intelligent cutting-off of pipes and bars.Machado, C.; Mendes, J.; Fonseca, J.IEEE International Symposium on Industrial Electronics2003
- Fuzzy logic speed control of an induction motor.Fonseca, J.; Afonso, J.L.; Martins, J.S.; Couto, C.Microprocessors and Microsystems1999
- Evaluation of fuzzy logic techniques applied to the control of electrical machines,Evaluacion de la aplicacion de tecnicas de logica difusa en el control de maquinas electricas.Fonseca, J.F.; Afonso, J.L.; Martins, J.S.; Couto, C.A.Informacion Tecnologica1999
- Control of a robot painting system using the multi-resolution architectural principle - a summary.Santos, Cristina; Monteiro, Nuno; Fonseca, Jaime; Garrido, Paulo; Couto, CarlosIEEE International Symposium on Industrial Electronics1997
- Fuzzy logic techniques applied to the control of a three-phase induction motor.Afonso, Joao L.; Fonseca, Jaime; Martins, Julio S.; Couto, Carlos A.IEEE International Symposium on Industrial Electronics1997
- Experimental results of speed control in electrical machines using fuzzy logic controllers.Montero, O.; Fonseca, J.; Bautista, S.; Castellanos, R.; Alejos, R.International Power Electronics Congress - CIEP1996
ALGORITMI Members
From 2010 to 2016
At ALGORITMIAcademic DegreePhD (Doutoramento)PositionAssociate Professor (Professor Associado) at Escola de Engenharia da Universidade do Minho
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